Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015942848.1_cds_XP_016486198.1_77052
CDS Infomation

[gene=LOC107806543] [db_xref=GeneID:107806543] [protein=deoxyribodipyrimidine photo-lyase-like] [protein_id=XP_016486198.1] [location=join(14740..15042,15684..16024,16106..16346,17101..17258,17453..17489,17753..17811,18588..18669,18741..18812,19428..19601)] [gbkey=CDS]
Sequence

ATGGCATCTCCGATCCCAGTCGTTCAGTCTGGTCGGATCCGGGTTCTGAAGCAAGGATCA
GGACCGTTGGTTGGACCGGTAGTGTATTGGATGTTCAGAGATCAACGGATAAGAGATAAC
TGGGCATTAATCCACGCCGTTGATGAGGCTAACAAAGCAAATGTACCAGTAGCTATTGCT
TTCAATTTGTTCGATCAGTTCTTAGGCGCAAAAGCTAGACAGTTAGGGTTTATGCTTAGA
GGCCTTCAAAAACTTCACAGCAACCTCGAAAATACTCTTCAAATTCCCTTTTTTATATTT
CAGGGAGAAGCTGTCGACACAATTCCCAATTTTCTGAAAGAATGTGGAGCTTCTCTTTTA
GTAACAGATTTCTCACCTTTGAGGGATGTGCGGAGTTGGAAGGAAAAAATTTGTGAGAGA
GTGAGTGAATCGGTAACAGTACACGAGGTTGATGCGCACAATGTTGTTCCTGTTTGGGTG
GCATCGAATAAATTGGAATACAGTGCGAAAACCATACGGGGTAAAATAAATAAGCTGCTT
CCTGAGTATCTAATCGAATTACCTGCAATAGGGCCTCCCAAGATAAAGTGGTTATCTCCA
AATCCTCCAATAGATTGGCCAAAATTAATTGCCGATGTTGTAAGGAAAGGAGCAGAAGTT
CCTGAACTTGAATGGTGTGAACCAGGTGAAGATGCTGCATTGGAAGTGCTTATGGGAAGT
AAAAATGGGTTCCTGACAGCTAGGTTGAAAAATTATTCAACAGAGCGGAACAACCCTCTG
AAACCCCAAGCACTTTCTGGTCTCTCTCCTTATTTGCACTTTGGGCAGATATCAGCACAG
CGATGTGCTTTAGAAGCACACAAAGTTCGGAAGCTTTATACCCAGGCAGTTGACACATTT
CTGGAGGAATTGATTGTGCGCAGAGAGCTTGCTGATAACTTCTGCTACTACCAGCCTCGA
TATGATTCATTACTGGGTGCATGGGAATGGGCACGTAAAACCTTGATGGAACATGCATCT
GATAAGCGTGAACATATATACACGCGAGAGCAATTGGAGAAGGCACAAACTGCAGACCCG
CTTTGGAATGCTTCTCAGTTAGAGATGGTTCACTATGGAAAAATGCATGGTTTTATGAGG
ATGTATTGGGCTAAAAAGATACTTGAATGGACAAGTGGACCAGAAGAAGCTCTGGCCATC
ACGATATATTTGAATGACAAGTATCATATAGATGGAAGAGATCCTAGTGGTTATGTTGGA
TGCATGTGGTCAATATGTGGCCTACACGACCAGGGTTGGCGAGAGCGTCCCGTATTTGGG
AAAATACGGTACATGAACTATGCAGGTTGCAAGAGGAAATTCAACGTGGATGGATATATT
TCATACGTCAAAAGACTTGTAGGCGAAAGCAAGAAAAGAAAAGCAGAAGTATTTTTCGAC
AAGAAGGCAAAGGAACTGCGTAGTTAG

Peptide Sequence

PEP ID

XP_016486198.1
PEP Infomation

PREDICTED: deoxyribodipyrimidine photo-lyase-like [Nicotiana tabacum]
Sequence

MASPIPVVQSGRIRVLKQGSGPLVGPVVYWMFRDQRIRDNWALIHAVDEANKANVPVAIA
FNLFDQFLGAKARQLGFMLRGLQKLHSNLENTLQIPFFIFQGEAVDTIPNFLKECGASLL
VTDFSPLRDVRSWKEKICERVSESVTVHEVDAHNVVPVWVASNKLEYSAKTIRGKINKLL
PEYLIELPAIGPPKIKWLSPNPPIDWPKLIADVVRKGAEVPELEWCEPGEDAALEVLMGS
KNGFLTARLKNYSTERNNPLKPQALSGLSPYLHFGQISAQRCALEAHKVRKLYTQAVDTF
LEELIVRRELADNFCYYQPRYDSLLGAWEWARKTLMEHASDKREHIYTREQLEKAQTADP
LWNASQLEMVHYGKMHGFMRMYWAKKILEWTSGPEEALAITIYLNDKYHIDGRDPSGYVG
CMWSICGLHDQGWRERPVFGKIRYMNYAGCKRKFNVDGYISYVKRLVGESKKRKAEVFFD
KKAKELRS

Transcript Sequence

Gene sequence data has not been registered.